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| Locus name | AT3G24860 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Protein degradation/modification | | Effect for Senescence | unclear | | Gene Description | hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: transcription factor (TAIR:AT2G44730.1); Has 700 Blast hits to 557 proteins in 131 species: Archae - 0; Bacteria - 29; Metazoa - 100; Fungi - 40; Plants - 346; Viruses - 61; Other Eukaryotes - 124 (source: NCBI BLink). | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Sequence | AT3G24860.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT3G24860.1
miRNA: ath-miR2934-5p
miRNA: ath-miR2934-5p
mfe: -33.8 kcal/mol
p-value: 0.000150
position: 785
target 5' A U G 3'
UUAGGGCGUUUGC GAGAGA
GGUUCCGCAAACG CUUUCU
miRNA 3' A U 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_190240 | |
| Cross Link | |
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