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| Locus name | AT5G38220 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Protein degradation/modification | | Effect for Senescence | unclear | | Gene Description | hydrolase; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66900.1); Has 2836 Blast hits to 2834 proteins in 470 species: Archae - 0; Bacteria - 684; Metazoa - 538; Fungi - 117; Plants - 153; Viruses - 6; Other Eukaryotes - 1338 (source: NCBI BLink). | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Sequence | AT5G38220.1 | Genomic | mRNA | CDS | Protein
AT5G38220.2 | Genomic | mRNA | CDS | Protein
AT5G38220.3 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT5G38220.3
miRNA: ath-miR5021
miRNA: ath-miR5021
mfe: -30.5 kcal/mol
p-value: 0.000028
position: 8
target 5' C U 3'
UUUUCUUCUUCUUCUUCUU
AAAAGAAGAAGAAGAAGAG
miRNA 3' U 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_127017 | |
| Cross Link | |
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