Basic information
Locus name	AT5G47590
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	heat shock protein-related; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Small heat shock protein, predicted, plant (InterPro:IPR016952), Peptidase A1 (InterPro:IPR001461), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein-related (TAIR:AT4G16550.1); Has 51 Blast hits to 42 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process proteolysis molecular function aspartic-type endopeptidase activity
Sequence	AT5G47590.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_190681	Accession Taxon NP_199570 ( AT5G47590 ) Arabidopsis thaliana 29916.m000535 Ricinus communis 29916.m000538 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF030283 2.6E-193 1 250 IPR016952 Small heat shock protein, predicted, plant SUPERFAMILY SSF49764 1.2E-5 43 124 IPR008978 HSP20-like chaperone PANTHER PTHR13683 2.7E-49 80 140 IPR001461 Peptidase A1 SUPERFAMILY SSF49764 3.8E-7 166 250 IPR008978 HSP20-like chaperone