Basic information
Locus name	AT4G35860
Alias	ATGB2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	GTP-BINDING 2 (ATGB2); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C); GTP binding / GTPase (TAIR:AT4G17170.1); Has 21378 Blast hits to 21327 proteins in 605 species: Archae - 11; Bacteria - 90; Metazoa - 12055; Fungi - 2480; Plants - 1843; Viruses - 19; Other Eukaryotes - 4880 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process small GTPase mediated signal transduction molecular function GTP binding
Pathway	Reactome REACT_11044
Sequence	AT4G35860.1 | Genomic | mRNA | CDS | Protein AT4G35860.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128031	Accession Taxon NP_193450 Arabidopsis thaliana NP_195311 ( AT4G35860 ) Arabidopsis thaliana CMS346C Cyanidioschyzon merolae strain 10D 148836 Chlamydomonas reinhardtii ACO60748 Micromonas sp. RCC299 NP_001047267 Oryza sativa Japonica Group NP_001053048 Oryza sativa Japonica Group e_gw1.07.00.367.1 Ostreococcus tauri estExt_Genewise1.C_3410059 Physcomitrella patens subsp. patens estExt_Genewise1.C_640127 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1960061 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_2150035 Physcomitrella patens subsp. patens 30142.m000636 Ricinus communis gw1.10.194.1 Thalassiosira pseudonana CCMP1335 XP_002954753 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF52540 1.9E-60 1 179 IPR027417 P-loop containing nucleoside triphosphate hydrolase ProSiteProfiles PS51419 29.4 2 210 No hit NA PANTHER PTHR24073 3.3E-141 3 211 No hit NA SMART SM00173 1.4E-36 4 170 IPR020849 Small GTPase superfamily, Ras type PRINTS PR00449 1.2E-42 7 28 IPR001806 Small GTPase superfamily SMART SM00175 2.4E-109 7 170 IPR003579 Small GTPase superfamily, Rab type TIGRFAM TIGR00231 7.3E-32 7 160 IPR005225 Small GTP-binding protein domain Pfam PF00071 1.8E-62 8 168 IPR001806 Small GTPase superfamily SMART SM00174 5.5E-12 9 170 IPR003578 Small GTPase superfamily, Rho type SMART SM00176 1.4E-5 12 203 IPR002041 Ran GTPase PRINTS PR00449 1.2E-42 30 46 IPR001806 Small GTPase superfamily PRINTS PR00449 1.2E-42 48 70 IPR001806 Small GTPase superfamily PRINTS PR00449 1.2E-42 110 123 IPR001806 Small GTPase superfamily PRINTS PR00449 1.2E-42 145 167 IPR001806 Small GTPase superfamily
Subcellular Localization
Localization 1 Localization cytosol Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization golgi Evidence SUBAcon Pubmed ID 23180787