Basic information   
Locus name AT3G47340
AliasASN1
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryProtein degradation/modification
Effect for Senescenceunclear
Gene DescriptionGLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1 (ASN1); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: in 8 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Glutamine amidotransferase, type II (InterPro:IPR017932), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426); BEST Arabidopsis thaliana protein match is: ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) (TAIR:AT5G65010.1); Has 7230 Blast hits to 7038 proteins in 1104 species: Archae - 190; Bacteria - 3243; Metazoa - 198; Fungi - 171; Plants - 235; Viruses - 5; Other Eukaryotes - 3188 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
Pathway
KEGG
SequenceAT3G47340.1 | Genomic | mRNA | CDS | Protein
AT3G47340.2 | Genomic | mRNA | CDS | Protein
AT3G47340.3 | Genomic | mRNA | CDS | Protein
Ortholog Group      
Ortholog Groups: OG5_127204
AccessionTaxon
NP_001031864Arabidopsis thaliana
NP_190318 ( AT3G47340 ) Arabidopsis thaliana
NP_196586Arabidopsis thaliana
NP_201306Arabidopsis thaliana
NP_850663Arabidopsis thaliana
NP_850664Arabidopsis thaliana
NP_851272Arabidopsis thaliana
CMM145CCyanidioschyzon merolae strain 10D
140252Chlamydomonas reinhardtii
ACO62590Micromonas sp. RCC299
ACO62759Micromonas sp. RCC299
ACO68363Micromonas sp. RCC299
NP_001049799Oryza sativa Japonica Group
NP_001057340Oryza sativa Japonica Group
0300010125Ostreococcus tauri
e_gw1.05.00.103.1Ostreococcus tauri
estExt_Genewise1.C_3500008Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_4100023Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_440158Physcomitrella patens subsp. patens
28281.m000370Ricinus communis
29594.m000267Ricinus communis
estExt_thaps1_ua_kg.C_chr_40225Thalassiosira pseudonana CCMP1335
XP_002955283Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRSFPIRSF0015891.9E-1531533IPR006426Asparagine synthase, glutamine-hydrolyzing
SUPERFAMILYSSF562351.8E-551195No hitNA
PANTHERPTHR117727.2E-2142512No hitNA
ProSiteProfilesPS5127835.82185IPR017932Glutamine amidotransferase type 2 domain
TIGRFAMTIGR015361.3E-1062367IPR006426Asparagine synthase, glutamine-hydrolyzing
PfamPF135372.6E-3848165IPR000583Class II glutamine amidotransferase domain
SUPERFAMILYSSF524022.3E-72202480No hitNA
PfamPF007331.2E-70210450IPR001962Asparagine synthase