Basic information
Locus name	AT3G63310
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	glutamate binding; FUNCTIONS IN: glutamate binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: glutamate binding (TAIR:AT1G03070.1); Has 3660 Blast hits to 3660 proteins in 893 species: Archae - 0; Bacteria - 1631; Metazoa - 704; Fungi - 90; Plants - 142; Viruses - 53; Other Eukaryotes - 1040 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT3G63310.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_126826	Accession Taxon NP_171806 Arabidopsis thaliana NP_191890 ( AT3G63310 ) Arabidopsis thaliana NP_192178 Arabidopsis thaliana NP_193209 Arabidopsis thaliana NP_567466 Arabidopsis thaliana CMD017C Cyanidioschyzon merolae strain 10D 136653 Chlamydomonas reinhardtii 182385 Chlamydomonas reinhardtii 195480 Chlamydomonas reinhardtii NP_001051246 Oryza sativa Japonica Group NP_001051550 Oryza sativa Japonica Group NP_001051551 Oryza sativa Japonica Group NP_001055493 Oryza sativa Japonica Group NP_001059025 Oryza sativa Japonica Group NP_001059026 Oryza sativa Japonica Group NP_001068154 Oryza sativa Japonica Group e_gw1.25.250.1 Physcomitrella patens subsp. patens fgenesh1_kg.scaffold_104000006 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_102000017 Physcomitrella patens subsp. patens 29703.m001465 Ricinus communis 29703.m001466 Ricinus communis 29726.m003929 Ricinus communis gw1.13.152.1 Thalassiosira pseudonana CCMP1335 XP_002945727 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23291 4.0E-159 1 238 IPR006214 Bax inhibitor 1-related Pfam PF01027 1.4E-43 28 234 IPR006214 Bax inhibitor 1-related