Basic information
Locus name	AT3G24050
Alias	GATA-1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	GATA transcription factor 1 (GATA-1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 3, putative (GATA-3) (TAIR:AT4G34680.2); Has 1004 Blast hits to 980 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 150; Fungi - 352; Plants - 444; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding zinc ion binding
Sequence	AT3G24050.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_160233	Accession Taxon NP_189047 ( AT3G24050 ) Arabidopsis thaliana ACO60929 Micromonas sp. RCC299 29904.m003012 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10071 2.9E-43 171 260 No hit NA SMART SM00401 8.8E-15 190 240 IPR000679 Zinc finger, GATA-type ProSiteProfiles PS50114 12.1 193 226 IPR000679 Zinc finger, GATA-type SUPERFAMILY SSF57716 8.1E-15 193 253 No hit NA Pfam PF00320 9.6E-17 196 230 IPR000679 Zinc finger, GATA-type ProSitePatterns PS00344 NA 196 221 IPR000679 Zinc finger, GATA-type
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787