Basic information
Locus name	AT5G27320
Alias	GID1C
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway
Effect for Senescence	unclear
Gene Description	GA INSENSITIVE DWARF1C (GID1C); FUNCTIONS IN: hydrolase activity; INVOLVED IN: raffinose family oligosaccharide biosynthetic process, floral organ morphogenesis, positive regulation of gibberellic acid mediated signaling, response to gibberellin stimulus, gibberellin-mediated signaling; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: GID1A (GA INSENSITIVE DWARF1A); hydrolase (TAIR:AT3G05120.1); Has 5367 Blast hits to 5358 proteins in 858 species: Archae - 47; Bacteria - 2902; Metazoa - 391; Fungi - 448; Plants - 647; Viruses - 3; Other Eukaryotes - 929 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metabolic process molecular function hydrolase activity
Sequence	AT5G27320.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126961	Accession Taxon NP_187163 Arabidopsis thaliana NP_196275 Arabidopsis thaliana NP_197744 Arabidopsis thaliana NP_198084 ( AT5G27320 ) Arabidopsis thaliana NP_850782 Arabidopsis thaliana CMF053C Cyanidioschyzon merolae strain 10D NP_001042057 Oryza sativa Japonica Group NP_001042062 Oryza sativa Japonica Group NP_001042063 Oryza sativa Japonica Group NP_001051515 Oryza sativa Japonica Group NP_001055520 Oryza sativa Japonica Group NP_001057470 Oryza sativa Japonica Group NP_001058947 Oryza sativa Japonica Group NP_001058948 Oryza sativa Japonica Group NP_001058949 Oryza sativa Japonica Group NP_001058950 Oryza sativa Japonica Group NP_001058951 Oryza sativa Japonica Group NP_001060231 Oryza sativa Japonica Group NP_001060440 Oryza sativa Japonica Group NP_001060441 Oryza sativa Japonica Group NP_001060443 Oryza sativa Japonica Group NP_001067576 Oryza sativa Japonica Group NP_001067580 Oryza sativa Japonica Group NP_001067581 Oryza sativa Japonica Group e_gw1.25.238.1 Physcomitrella patens subsp. patens e_gw1.33.112.1 Physcomitrella patens subsp. patens e_gw1.37.179.1 Physcomitrella patens subsp. patens e_gw1.37.238.1 Physcomitrella patens subsp. patens e_gw1.91.190.1 Physcomitrella patens subsp. patens 29333.m001098 Ricinus communis 29755.m000440 Ricinus communis 29848.m004636 Ricinus communis 29910.m000927 Ricinus communis 29910.m000966 Ricinus communis 29929.m004742 Ricinus communis 29983.m003304 Ricinus communis 30008.m000796 Ricinus communis 30128.m008695 Ricinus communis thaps1_ua_kg.chr_5000070 Thalassiosira pseudonana CCMP1335 XP_002959591 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23024 3.6E-136 27 342 No hit NA SUPERFAMILY SSF53474 1.5E-54 27 340 No hit NA Pfam PF07859 4.0E-60 107 320 IPR013094 Alpha/beta hydrolase fold-3 ProSitePatterns PS01173 NA 107 123 IPR002168 Lipase, GDXG, active site ProSitePatterns PS01174 NA 183 195 IPR002168 Lipase, GDXG, active site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787