Basic information
Locus name	AT1G78380
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Detoxification
Effect for Senescence	Unclear
Gene Description	Gluthatione S transferase
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	molecular function protein binding
Sequence	AT1G78380.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G78380.1  miRNA: ath-miR157a miRNA: ath-miR157a mfe: -26.2 kcal/mol  p-value: 0.003359  position:  782  target 5' A             A  U   U 3'             UGCUCUCUGUUUU CU UCG              ACGAGAGAUAGAA GA AGU   miRNA  3' C                C   U 5'  target: AT1G78380.1  miRNA: ath-miR157b miRNA: ath-miR157b mfe: -26.2 kcal/mol  p-value: 0.003062  position:  782  target 5' A             A  U   U 3'             UGCUCUCUGUUUU CU UCG              ACGAGAGAUAGAA GA AGU   miRNA  3' C                C   U 5'  target: AT1G78380.1  miRNA: ath-miR157c miRNA: ath-miR157c mfe: -26.2 kcal/mol  p-value: 0.002196  position:  782  target 5' A             A  U   U 3'             UGCUCUCUGUUUU CU UCG              ACGAGAGAUAGAA GA AGU   miRNA  3' C                C   U 5'  target: AT1G78380.1  miRNA: ath-miR157d miRNA: ath-miR157d mfe: -26.0 kcal/mol  p-value: 0.004589  position:  782  target 5' A             A  U   U 3'             UGCUCUCUGUUUU CU UCG              ACGAGAGAUAGAA GA AGU   miRNA  3' C                C     5'  target: AT1G78380.1  miRNA: ath-miR413 miRNA: ath-miR413 mfe: -23.6 kcal/mol  p-value: 0.037774  position:  655  target 5' U       G     C U     A 3'             UGCAGAG GAGAG G GGCUA              ACGUCUU UUCUC U UUGAU   miRNA  3' C       G             A 5'  target: AT1G78380.1  miRNA: ath-miR837-5p miRNA: ath-miR837-5p mfe: -21.7 kcal/mol  p-value: 0.062922  position:  439  target 5' G U  G           A  G 3'             G GA GAACAAGAGGC GG              C UU CUUGUUCUUUG CU   miRNA  3' A U  G           A  A 5'
Ortholog Group
Ortholog Groups: OG5_126817	Accession Taxon NP_172507 Arabidopsis thaliana NP_172508 Arabidopsis thaliana NP_173160 Arabidopsis thaliana NP_173161 Arabidopsis thaliana NP_173162 Arabidopsis thaliana NP_176176 Arabidopsis thaliana NP_176178 Arabidopsis thaliana NP_177955 Arabidopsis thaliana NP_177956 Arabidopsis thaliana NP_177957 Arabidopsis thaliana NP_177958 Arabidopsis thaliana NP_189966 Arabidopsis thaliana NP_191064 Arabidopsis thaliana NP_565178 ( AT1G78380 ) Arabidopsis thaliana ACO62034 Micromonas sp. RCC299 ACO64352 Micromonas sp. RCC299 ACO66720 Micromonas sp. RCC299 NP_001043332 Oryza sativa Japonica Group NP_001043939 Oryza sativa Japonica Group NP_001049751 Oryza sativa Japonica Group NP_001049752 Oryza sativa Japonica Group NP_001051485 Oryza sativa Japonica Group NP_001059595 Oryza sativa Japonica Group NP_001063007 Oryza sativa Japonica Group NP_001064445 Oryza sativa Japonica Group NP_001065115 Oryza sativa Japonica Group NP_001065118 Oryza sativa Japonica Group NP_001065119 Oryza sativa Japonica Group NP_001065121 Oryza sativa Japonica Group NP_001065122 Oryza sativa Japonica Group NP_001065123 Oryza sativa Japonica Group NP_001065124 Oryza sativa Japonica Group NP_001065125 Oryza sativa Japonica Group NP_001065126 Oryza sativa Japonica Group NP_001065128 Oryza sativa Japonica Group NP_001065129 Oryza sativa Japonica Group NP_001065131 Oryza sativa Japonica Group NP_001065132 Oryza sativa Japonica Group NP_001065133 Oryza sativa Japonica Group NP_001065134 Oryza sativa Japonica Group NP_001065135 Oryza sativa Japonica Group NP_001065136 Oryza sativa Japonica Group NP_001065137 Oryza sativa Japonica Group NP_001065138 Oryza sativa Japonica Group NP_001065139 Oryza sativa Japonica Group NP_001065141 Oryza sativa Japonica Group NP_001065142 Oryza sativa Japonica Group 1600010042 Ostreococcus tauri estExt_Genewise1.C_2710008 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_241000038 Physcomitrella patens subsp. patens gw1.145.138.1 Physcomitrella patens subsp. patens 29591.m000134 Ricinus communis 29758.m000656 Ricinus communis 30146.m003618 Ricinus communis 30146.m003619 Ricinus communis 30155.m001619 Ricinus communis 30171.m000413 Ricinus communis 31848.m000026 Ricinus communis fgenesh1_pg.C_chr_4000705 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11260 3.5E-128 2 214 No hit NA ProSiteProfiles PS50404 20.3 3 82 IPR004045 Glutathione S-transferase, N-terminal SUPERFAMILY SSF52833 2.1E-21 4 107 IPR012336 Thioredoxin-like fold Pfam PF13417 1.4E-13 7 77 No hit NA SUPERFAMILY SSF47616 2.3E-49 76 216 IPR010987 Glutathione S-transferase, C-terminal-like ProSiteProfiles PS50405 22.9 88 208 IPR017933 Glutathione S-transferase/chloride channel, C-terminal Pfam PF00043 3.4E-14 97 193 IPR004046 Glutathione S-transferase, C-terminal
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787