Basic information
Locus name	AT4G12290
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Detoxification
Effect for Senescence	Unclear
Gene Description	Copper Amine Oxidase
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	biological process amine metabolic process oxidation-reduction process molecular function copper ion binding primary amine oxidase activity quinone binding
Pathway	KEGG map00260 (EC 1.4.3.21) map00350 (EC 1.4.3.21) map00360 (EC 1.4.3.21) map00410 (EC 1.4.3.21) map00950 (EC 1.4.3.21) map00960 (EC 1.4.3.21) MetaCyc PWY-5751
Sequence	AT4G12290.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT4G12290.1  miRNA: ath-miR171a miRNA: ath-miR171a mfe: -26.8 kcal/mol  p-value: 0.027798  position:  1319  target 5' A              G   C  C 3'             GAUAUUGG GUGGC UCA UC              CUAUAACC CGCCG AGU AG   miRNA  3'          G         U  U 5'
Ortholog Group
Ortholog Groups: OG5_127171	Accession Taxon NP_174448 Arabidopsis thaliana NP_174450 Arabidopsis thaliana NP_174452 Arabidopsis thaliana NP_176469 Arabidopsis thaliana NP_181777 Arabidopsis thaliana NP_189953 Arabidopsis thaliana NP_192964 Arabidopsis thaliana NP_192966 ( AT4G12290 ) Arabidopsis thaliana NP_193230 Arabidopsis thaliana CMI002C Cyanidioschyzon merolae strain 10D CMS002C Cyanidioschyzon merolae strain 10D CMT003C Cyanidioschyzon merolae strain 10D 176519 Chlamydomonas reinhardtii 178662 Chlamydomonas reinhardtii 206147 Chlamydomonas reinhardtii ACO61125 Micromonas sp. RCC299 NP_001052338 Oryza sativa Japonica Group NP_001053078 Oryza sativa Japonica Group NP_001057559 Oryza sativa Japonica Group NP_001057560 Oryza sativa Japonica Group NP_001060056 Oryza sativa Japonica Group e_gw1.178.73.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1520046 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_260098 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_360016 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_90089 Physcomitrella patens subsp. patens 27504.m000638 Ricinus communis 29726.m003897 Ricinus communis 29726.m003899 Ricinus communis 29726.m003901 Ricinus communis 29726.m003902 Ricinus communis 30147.m013883 Ricinus communis 30190.m011011 Ricinus communis 30190.m011012 Ricinus communis XP_002953864 Volvox carteri f. nagariensis XP_002959097 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10638 0.0 66 734 IPR000269 Copper amine oxidase SUPERFAMILY SSF54416 2.5E-19 80 165 IPR016182 Copper amine oxidase, N-terminal Pfam PF02727 7.9E-30 82 167 IPR015800 Copper amine oxidase, N2-terminal SUPERFAMILY SSF54416 9.5E-34 173 282 IPR016182 Copper amine oxidase, N-terminal Pfam PF02728 2.1E-33 175 274 IPR015802 Copper amine oxidase, N3-terminal SUPERFAMILY SSF49998 3.3E-152 293 728 IPR015798 Copper amine oxidase, C-terminal Pfam PF01179 3.0E-147 297 726 IPR015798 Copper amine oxidase, C-terminal ProSitePatterns PS01164 NA 455 468 IPR000269 Copper amine oxidase ProSitePatterns PS01165 NA 685 698 IPR000269 Copper amine oxidase
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787