Basic information
Locus name	AT4G16440
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation
Effect for Senescence	unclear
Gene Description	ferredoxin hydrogenase; FUNCTIONS IN: ferredoxin hydrogenase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 1180 Blast hits to 1122 proteins in 331 species: Archae - 0; Bacteria - 663; Metazoa - 177; Fungi - 137; Plants - 41; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT4G16440.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127303	Accession Taxon NP_567496 ( AT4G16440 ) Arabidopsis thaliana CML104C Cyanidioschyzon merolae strain 10D 117241 Chlamydomonas reinhardtii 183963 Chlamydomonas reinhardtii 24189 Chlamydomonas reinhardtii ACO62888 Micromonas sp. RCC299 NP_001051271 Oryza sativa Japonica Group fgenesh1_pg.C_Chr_03.0001000269 Ostreococcus tauri e_gw1.240.16.1 Physcomitrella patens subsp. patens 29826.m000760 Ricinus communis thaps1_ua_kg.chr_23000023 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_4000136 Thalassiosira pseudonana CCMP1335 XP_002948483 Volvox carteri f. nagariensis XP_002948487 Volvox carteri f. nagariensis XP_002956049 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11615 1.8E-196 49 474 No hit NA SUPERFAMILY SSF53920 2.1E-115 60 461 IPR009016 Iron hydrogenase Pfam PF02906 1.4E-92 92 401 IPR004108 Iron hydrogenase, large subunit, C-terminal SMART SM00902 6.8E-14 406 464 IPR003149 Iron hydrogenase, small subunit-like Pfam PF02256 2.0E-8 419 462 IPR003149 Iron hydrogenase, small subunit-like
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787