Basic information
Locus name	AT3G52370
Alias	FLA15
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR (FLA15); INVOLVED IN: cell adhesion; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR) (TAIR:AT2G35860.1); Has 934 Blast hits to 889 proteins in 194 species: Archae - 6; Bacteria - 394; Metazoa - 153; Fungi - 10; Plants - 151; Viruses - 3; Other Eukaryotes - 217 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT3G52370.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_147234	Accession Taxon NP_190805 ( AT3G52370 ) Arabidopsis thaliana NP_196257 Arabidopsis thaliana NP_566398 Arabidopsis thaliana NP_850253 Arabidopsis thaliana NP_001051504 Oryza sativa Japonica Group NP_001051505 Oryza sativa Japonica Group NP_001058941 Oryza sativa Japonica Group e_gw1.402.28.1 Physcomitrella patens subsp. patens gw1.88.63.1 Physcomitrella patens subsp. patens 29333.m001081 Ricinus communis 29854.m001118 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32499 0.0 1 436 No hit NA ProSiteProfiles PS50213 18.9 31 165 IPR000782 FAS1 domain SUPERFAMILY SSF82153 5.0E-21 33 168 IPR000782 FAS1 domain Pfam PF02469 1.2E-20 43 167 IPR000782 FAS1 domain SMART SM00554 5.1E-19 70 168 IPR000782 FAS1 domain SUPERFAMILY SSF82153 2.5E-19 228 395 IPR000782 FAS1 domain ProSiteProfiles PS50213 9.4 249 392 IPR000782 FAS1 domain Pfam PF02469 2.4E-7 274 394 IPR000782 FAS1 domain SMART SM00554 5.4E-15 290 395 IPR000782 FAS1 domain
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787