Basic information
Locus name	AT5G47880
Alias	ERF1-1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	EUKARYOTIC RELEASE FACTOR 1-1 (ERF1-1); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF/aRF subunit 1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: ERF1-3 (eukaryotic release factor 1-3); translation release factor (TAIR:AT3G26618.1); Has 800 Blast hits to 798 proteins in 276 species: Archae - 187; Bacteria - 6; Metazoa - 164; Fungi - 97; Plants - 79; Viruses - 1; Other Eukaryotes - 266 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process translational termination cellular component cytoplasm molecular function translation release factor activity, codon specific
Sequence	AT5G47880.1 | Genomic | mRNA | CDS | Protein AT5G47880.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127250	Accession Taxon NP_001032029 ( AT5G47880 ) Arabidopsis thaliana NP_172752 Arabidopsis thaliana NP_189295 Arabidopsis thaliana NP_199599 Arabidopsis thaliana CMM111C Cyanidioschyzon merolae strain 10D 182764 Chlamydomonas reinhardtii NP_113347 Guillardia theta ACO63410 Micromonas sp. RCC299 NP_001045349 Oryza sativa Japonica Group NP_001051012 Oryza sativa Japonica Group NP_001055370 Oryza sativa Japonica Group NP_001060137 Oryza sativa Japonica Group fgenesh1_pm.C_Chr_05.0001000035 Ostreococcus tauri e_gw1.329.11.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_900046 Physcomitrella patens subsp. patens estExt_fgenesh2_kg.C_1490004 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_90000010 Physcomitrella patens subsp. patens 30128.m008709 Ricinus communis 30131.m006925 Ricinus communis estExt_fgenesh1_pg.C_chr_40367 Thalassiosira pseudonana CCMP1335 XP_002948706 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10113 0.0 1 436 IPR004403 Peptide chain release factor eRF1/aRF1 SUPERFAMILY SSF55481 4.3E-58 6 140 IPR024049 Peptide Chain Release Factor eRF1/aRF1, N-terminal Pfam PF03463 4.1E-29 8 139 IPR005140 eRF1 domain 1/Pelota-like TIGRFAM TIGR03676 2.1E-125 12 417 IPR004403 Peptide chain release factor eRF1/aRF1 SUPERFAMILY SSF53137 1.6E-46 142 276 No hit NA Pfam PF03464 6.5E-43 144 278 IPR005141 eRF1 domain 2 SUPERFAMILY SSF55315 7.5E-49 278 420 No hit NA Pfam PF03465 3.1E-35 281 418 IPR005142 eRF1 domain 3
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787