Basic information
Locus name	AT3G62800
Alias	DRB4
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	DOUBLE-STRANDED-RNA-BINDING PROTEIN 4 (DRB4); FUNCTIONS IN: double-stranded RNA binding, protein binding; INVOLVED IN: RNA interference, production of ta-siRNAs; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720); BEST Arabidopsis thaliana protein match is: DRB3 (dsRNA-binding protein 3); RNA binding / double-stranded RNA binding (TAIR:AT3G26932.2).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function double-stranded RNA binding
Sequence	AT3G62800.1 | Genomic | mRNA | CDS | Protein AT3G62800.2 | Genomic | mRNA | CDS | Protein AT3G62800.3 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_189662	Accession Taxon NP_001154686 Arabidopsis thaliana NP_191839 Arabidopsis thaliana NP_974480 ( AT3G62800 ) Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS50137 9.8 4 73 IPR001159 Double-stranded RNA-binding Pfam PF00035 2.8E-11 5 71 IPR001159 Double-stranded RNA-binding SMART SM00358 2.5E-12 5 72 IPR001159 Double-stranded RNA-binding SUPERFAMILY SSF54768 6.6E-18 5 76 No hit NA PANTHER PTHR10910 1.2E-42 79 151 No hit NA SUPERFAMILY SSF54768 7.4E-19 80 191 No hit NA ProSiteProfiles PS50137 13.8 82 150 IPR001159 Double-stranded RNA-binding Pfam PF00035 1.4E-13 83 144 IPR001159 Double-stranded RNA-binding SMART SM00358 1.6E-14 83 149 IPR001159 Double-stranded RNA-binding
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787