Basic information
Locus name	AT4G00940
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	Dof-type zinc finger domain-containing protein; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DAG1 (dof affecting germination 1); DNA binding / transcription factor (TAIR:AT3G61850.3); Has 644 Blast hits to 636 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 613; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function DNA binding zinc ion binding
Sequence	AT4G00940.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31992 1.1E-77 1 294 No hit NA Pfam PF02701 4.4E-35 64 122 IPR003851 Zinc finger, Dof-type ProSiteProfiles PS50884 28.4 68 122 IPR003851 Zinc finger, Dof-type ProSitePatterns PS01361 NA 70 106 IPR003851 Zinc finger, Dof-type
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787