Basic information
Locus name	AT3G47940
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	DNAJ heat shock protein, putative; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 19462 Blast hits to 18661 proteins in 2040 species: Archae - 133; Bacteria - 6045; Metazoa - 3755; Fungi - 1709; Plants - 1428; Viruses - 15; Other Eukaryotes - 6377 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein folding molecular function unfolded protein binding
Sequence	AT3G47940.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_212491	Accession Taxon NP_190377 ( AT3G47940 ) Arabidopsis thaliana 30147.m014058 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24077 1.2E-95 1 346 No hit NA SMART SM00271 1.2E-26 3 63 IPR001623 DnaJ domain SUPERFAMILY SSF46565 1.0E-28 3 79 IPR001623 DnaJ domain Pfam PF00226 1.2E-25 4 68 IPR001623 DnaJ domain ProSiteProfiles PS50076 23.0 4 71 IPR001623 DnaJ domain PRINTS PR00625 6.9E-26 6 24 IPR001623 DnaJ domain PRINTS PR00625 6.9E-26 24 39 IPR001623 DnaJ domain PRINTS PR00625 6.9E-26 43 63 IPR001623 DnaJ domain ProSitePatterns PS00636 NA 48 67 IPR018253 DnaJ domain, conserved site PRINTS PR00625 6.9E-26 63 82 IPR001623 DnaJ domain SUPERFAMILY SSF49493 3.4E-15 175 253 IPR008971 HSP40/DnaJ peptide-binding SUPERFAMILY SSF49493 2.8E-20 255 339 IPR008971 HSP40/DnaJ peptide-binding Pfam PF01556 1.8E-19 261 339 IPR002939 Chaperone DnaJ, C-terminal