Basic information   
Locus name AT5G14280
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene DescriptionDNA-binding storekeeper protein-related; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592), TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27270.1); Has 198 Blast hits to 194 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
cellular component
SequenceAT5G14280.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT5G14280.1 
miRNA: ath-miR414
miRNA: ath-miR414
mfe: -32.0 kcal/mol 
p-value: 0.000582 

position: 662 
target 5' G               U    U  3' 
           UGAUGAUGAUGAUGA GAUG     
           ACUGCUACUACUACU CUAC     
miRNA  3'                 U    U  5' 
Ortholog Group      
Ortholog Groups: OG5_141661
AccessionTaxon
NP_181175Arabidopsis thaliana
NP_189224Arabidopsis thaliana
NP_189363Arabidopsis thaliana
NP_196932 ( AT5G14280 ) Arabidopsis thaliana
NP_565602Arabidopsis thaliana
NP_567163Arabidopsis thaliana
NP_001055138Oryza sativa Japonica Group
e_gw1.142.55.1Physcomitrella patens subsp. patens
e_gw1.227.49.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_700006Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3760050Physcomitrella patens subsp. patens
29929.m004733Ricinus communis
30190.m010980Ricinus communis
estExt_fgenesh1_pg.C_chr_70639Thalassiosira pseudonana CCMP1335
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR317661.7E-1682572No hitNA
PfamPF045042.0E-3561155IPR007592Protein of unknown function DUF573
CoilsCoilNA277298No hitNA
ProSiteProfilesPS509229.6356566IPR006634TRAM/LAG1/CLN8 homology domain
SMARTSM007241.6E-43356561IPR006634TRAM/LAG1/CLN8 homology domain
PfamPF037984.4E-15362551IPR006634TRAM/LAG1/CLN8 homology domain