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| Locus name | AT3G12977 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Transcription regulation | | Effect for Senescence | unclear | | Gene Description | DNA binding; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC1; transcription factor (TAIR:AT1G56010.2); Has 1643 Blast hits to 1641 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1639; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Gene Ontology | | | Sequence | AT3G12977.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT3G12977.1
miRNA: ath-miR164a
miRNA: ath-miR164a
mfe: -41.6 kcal/mol
p-value: 0.000056
position: 717
target 5' A A A 3'
GCAUGU CCCUGCUUCUCCA
CGUGCA GGGACGAAGAGGU
miRNA 3' A C 5'
target: AT3G12977.1
miRNA: ath-miR164b
miRNA: ath-miR164b
mfe: -41.6 kcal/mol
p-value: 0.000042
position: 717
target 5' A A A 3'
GCAUGU CCCUGCUUCUCCA
CGUGCA GGGACGAAGAGGU
miRNA 3' A C 5'
target: AT3G12977.1
miRNA: ath-miR164c
miRNA: ath-miR164c
mfe: -41.6 kcal/mol
p-value: 0.000114
position: 717
target 5' A A A 3'
GCAUGU CCCUGCUUCUCCA
CGUGCA GGGACGAAGAGGU
miRNA 3' G C 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_164225 | |
| Cross Link | |
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