Basic information
Locus name	AT4G04860
Alias	DER2.2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	DERLIN-2.2 (DER2.2); INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DER2.1 (DERLIN-2.1) (TAIR:AT4G21810.1); Has 634 Blast hits to 633 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 294; Fungi - 119; Plants - 84; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT4G04860.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127013	Accession Taxon NP_192395 ( AT4G04860 ) Arabidopsis thaliana NP_193912 Arabidopsis thaliana NP_194662 Arabidopsis thaliana CMK163C Cyanidioschyzon merolae strain 10D 184920 Chlamydomonas reinhardtii 59675 Chlamydomonas reinhardtii NP_113250 Guillardia theta ACO64473 Micromonas sp. RCC299 ACO68315 Micromonas sp. RCC299 NP_001051921 Oryza sativa Japonica Group NP_001054838 Oryza sativa Japonica Group e_gw1.03.00.371.1 Ostreococcus tauri e_gw1.13.00.275.1 Ostreococcus tauri estExt_fgenesh1_pm.C_680031 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_2130061 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_2260040 Physcomitrella patens subsp. patens 29842.m003617 Ricinus communis 29912.m005359 Ricinus communis 52298.m000042 Ricinus communis e_gw1.6.462.1 Thalassiosira pseudonana CCMP1335 fgenesh1_pg.C_chr_6000689 Thalassiosira pseudonana CCMP1335 XP_002953487 Volvox carteri f. nagariensis XP_002955525 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11009 1.9E-103 1 233 IPR007599 Derlin SUPERFAMILY SSF144091 8.6E-14 11 195 No hit NA Pfam PF04511 3.6E-56 12 211 IPR007599 Derlin
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787