Basic information
Locus name	AT3G61880
Alias	CYP78A9
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation
Effect for Senescence	unclear
Gene Description	CYTOCHROME P450 78A9 (CYP78A9); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: fruit development; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, flower development stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, C-terminal region (InterPro:IPR017973), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: CYP78A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (TAIR:AT2G46660.1); Has 22917 Blast hits to 22842 proteins in 1249 species: Archae - 21; Bacteria - 2037; Metazoa - 10180; Fungi - 4277; Plants - 5577; Viruses - 3; Other Eukaryotes - 822 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process oxidation-reduction process molecular function electron carrier activity heme binding iron ion binding oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Pathway	Reactome REACT_13433
Sequence	AT3G61880.1 | Genomic | mRNA | CDS | Protein AT3G61880.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_160092	Accession Taxon NP_171627 Arabidopsis thaliana NP_182189 Arabidopsis thaliana NP_191747 ( AT3G61880 ) Arabidopsis thaliana NP_001062428 Oryza sativa Japonica Group NP_001063738 Oryza sativa Japonica Group 30068.m002578 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24298 1.8E-87 23 542 No hit NA SUPERFAMILY SSF48264 4.2E-107 67 529 IPR001128 Cytochrome P450 Pfam PF00067 9.9E-85 68 511 IPR001128 Cytochrome P450 PRINTS PR00463 2.0E-33 212 230 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 2.0E-33 319 336 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 1.4E-9 330 347 IPR001128 Cytochrome P450 PRINTS PR00463 2.0E-33 339 365 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 2.0E-33 382 400 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 1.4E-9 383 394 IPR001128 Cytochrome P450 PRINTS PR00463 2.0E-33 424 448 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 2.0E-33 464 474 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 1.4E-9 465 474 IPR001128 Cytochrome P450 ProSitePatterns PS00086 NA 467 476 IPR017972 Cytochrome P450, conserved site PRINTS PR00385 1.4E-9 474 485 IPR001128 Cytochrome P450 PRINTS PR00463 2.0E-33 474 497 IPR002401 Cytochrome P450, E-class, group I