Basic information   
Locus name AT5G24160
AliasSQE6
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryRedox regulation:oxidoreductase
Effect for SenescenceUnclear
Gene DescriptionSQUALENE MONOXYGENASE 6 (SQE6);
EvidenceMolecular evidence: SSH and Northern [Ref 1]
References
1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M
Large-scale identification of leaf senescence-associated genes.
Plant J. 2003 Dec;36(5):629-42

Gene Ontology
biological process
molecular function
Pathway
KEGG
MetaCyc
SequenceAT5G24160.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_177285
AccessionTaxon
NP_001031935Arabidopsis thaliana
NP_197802Arabidopsis thaliana
NP_197803Arabidopsis thaliana
NP_197804 ( AT5G24160 ) Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR137897.2E-2348516No hitNA
PfamPF012661.6E-64777IPR006076FAD dependent oxidoreductase
PRINTSPR004201.5E-84769IPR003042Aromatic-ring hydroxylase-like
SUPERFAMILYSSF519053.8E-4047219No hitNA
PRINTSPR004201.5E-8198213IPR003042Aromatic-ring hydroxylase-like
PfamPF084911.0E-108199473IPR013698Squalene epoxidase
SUPERFAMILYSSF519053.8E-40315412No hitNA
PRINTSPR004201.5E-8328343IPR003042Aromatic-ring hydroxylase-like
PRINTSPR004201.5E-8343359IPR003042Aromatic-ring hydroxylase-like
Subcellular Localization   
Localizationplasma membrane
EvidenceSUBAcon
Pubmed ID23180787