Basic information
Locus name	AT3G48340
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	cysteine-type endopeptidase/ cysteine-type peptidase; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: cysteine proteinase, putative (TAIR:AT3G48350.1); Has 6143 Blast hits to 6088 proteins in 586 species: Archae - 30; Bacteria - 108; Metazoa - 2828; Fungi - 6; Plants - 1214; Viruses - 122; Other Eukaryotes - 1835 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process proteolysis molecular function cysteine-type peptidase activity
Sequence	AT3G48340.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12411 1.8E-179 1 352 IPR013128 Peptidase C1A, papain SUPERFAMILY SSF54001 3.9E-108 31 343 No hit NA Pfam PF08246 2.6E-12 38 93 IPR013201 Proteinase inhibitor I29, cathepsin propeptide SMART SM00848 6.8E-15 38 93 IPR013201 Proteinase inhibitor I29, cathepsin propeptide Pfam PF00112 2.2E-86 128 343 IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 3.9E-127 128 343 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.5E-10 146 161 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00139 NA 146 157 IPR000169 Cysteine peptidase, cysteine active site ProSitePatterns PS00639 NA 286 296 IPR025660 Cysteine peptidase, histidine active site PRINTS PR00705 1.5E-10 288 298 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.5E-10 303 309 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00640 NA 303 322 IPR025661 Cysteine peptidase, asparagine active site