Basic information
Locus name	AT5G28020
Alias	CYSD2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	CYSTEINE SYNTHASE D2 (CYSD2); FUNCTIONS IN: cysteine synthase activity; INVOLVED IN: cysteine biosynthetic process from serine, cysteine biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative (TAIR:AT5G28030.2); Has 12700 Blast hits to 12686 proteins in 1480 species: Archae - 239; Bacteria - 7205; Metazoa - 321; Fungi - 383; Plants - 356; Viruses - 0; Other Eukaryotes - 4196 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G28020.1 | Genomic | mRNA | CDS | Protein AT5G28020.2 | Genomic | mRNA | CDS | Protein AT5G28020.3 | Genomic | mRNA | CDS | Protein AT5G28020.4 | Genomic | mRNA | CDS | Protein AT5G28020.5 | Genomic | mRNA | CDS | Protein AT5G28020.6 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126662	Accession Taxon NP_001031956 Arabidopsis thaliana NP_001031957 Arabidopsis thaliana NP_001078628 ( AT5G28020 ) Arabidopsis thaliana NP_181903 Arabidopsis thaliana NP_191535 Arabidopsis thaliana NP_193224 Arabidopsis thaliana NP_198154 Arabidopsis thaliana NP_198155 Arabidopsis thaliana NP_566243 Arabidopsis thaliana NP_849386 Arabidopsis thaliana NP_851022 Arabidopsis thaliana NP_851023 Arabidopsis thaliana NP_851087 Arabidopsis thaliana NP_974843 Arabidopsis thaliana CMS037C Cyanidioschyzon merolae strain 10D CMT313C Cyanidioschyzon merolae strain 10D 175651 Chlamydomonas reinhardtii 183351 Chlamydomonas reinhardtii 189320 Chlamydomonas reinhardtii 196886 Chlamydomonas reinhardtii 205986 Chlamydomonas reinhardtii ACO61071 Micromonas sp. RCC299 ACO61205 Micromonas sp. RCC299 NP_001045577 Oryza sativa Japonica Group NP_001051262 Oryza sativa Japonica Group NP_001056819 Oryza sativa Japonica Group NP_001056820 Oryza sativa Japonica Group NP_001057882 Oryza sativa Japonica Group NP_001057884 Oryza sativa Japonica Group NP_001057885 Oryza sativa Japonica Group NP_001067319 Oryza sativa Japonica Group 1200010309 Ostreococcus tauri gw1.07.00.279.1 Ostreococcus tauri e_gw1.17.76.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_710078 Physcomitrella patens subsp. patens fgenesh2_pg.scaffold_105000044 Physcomitrella patens subsp. patens 29747.m001062 Ricinus communis 29844.m003285 Ricinus communis 30128.m008638 Ricinus communis 30128.m008639 Ricinus communis 30128.m008641 Ricinus communis 30128.m008642 Ricinus communis 30128.m008643 Ricinus communis e_gw1.2.308.1 Thalassiosira pseudonana CCMP1335 XP_002946965 Volvox carteri f. nagariensis XP_002948674 Volvox carteri f. nagariensis XP_002949438 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10314 1.4E-121 1 237 No hit NA Pfam PF00291 5.9E-40 1 212 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily SUPERFAMILY SSF53686 2.1E-70 2 227 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787