Basic information
Locus name	AT5G20650
Alias	COPT5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	COPT5; FUNCTIONS IN: high affinity copper ion transmembrane transporter activity, copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: copper transporter, putative (TAIR:AT2G26975.1); Has 357 Blast hits to 356 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 192; Fungi - 45; Plants - 78; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process copper ion transmembrane transport cellular component integral to membrane molecular function copper ion transmembrane transporter activity
Sequence	AT5G20650.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_135565	Accession Taxon NP_197565 ( AT5G20650 ) Arabidopsis thaliana NP_001063282 Oryza sativa Japonica Group e_gw1.54.150.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_1300036 Physcomitrella patens subsp. patens 29739.m003637 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12483 5.2E-70 1 143 IPR007274 Ctr copper transporter Pfam PF04145 1.8E-33 2 128 IPR007274 Ctr copper transporter
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787