Basic information
Locus name	AT4G29820
Alias	CFIM-25
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	CFIM-25; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cleavage and polyadenylation specificity factor, 25 kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: protein binding (TAIR:AT4G25550.1); Has 288 Blast hits to 286 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 53; Plants - 42; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process mRNA polyadenylation cellular component mRNA cleavage factor complex molecular function mRNA binding
Sequence	AT4G29820.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_191021	Accession Taxon NP_567835 ( AT4G29820 ) Arabidopsis thaliana NP_001061747 Oryza sativa Japonica Group 29912.m005306 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF017888 1.3E-119 3 222 IPR016706 Cleavage/polyadenylation specificity factor subunit 5 PANTHER PTHR13047 3.5E-104 26 222 IPR016706 Cleavage/polyadenylation specificity factor subunit 5 Pfam PF13869 2.0E-77 29 215 IPR016706 Cleavage/polyadenylation specificity factor subunit 5 SUPERFAMILY SSF55811 2.5E-6 68 118 IPR015797 NUDIX hydrolase domain-like