Basic information
Locus name	AT5G48380
Alias	BIR1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction:protein kinase
Effect for Senescence	Unclear
Gene Description	Receptor-like protein kinase.BAK1-INTERACTING RECEPTOR-LIKE KINASE 1
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	biological process protein phosphorylation molecular function ATP binding protein binding protein kinase activity
Sequence	AT5G48380.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G48380.1  miRNA: ath-miR390a miRNA: ath-miR390a mfe: -31.1 kcal/mol  p-value: 0.015380  position:  1880  target 5' C        G     A     A 3'             GGUGUUGU CUUCU GAGCU              CCGCGAUA GGAGG CUCGA   miRNA  3'          G     A     A 5'  target: AT5G48380.1  miRNA: ath-miR390b miRNA: ath-miR390b mfe: -31.1 kcal/mol  p-value: 0.016885  position:  1880  target 5' C        G     A     A 3'             GGUGUUGU CUUCU GAGCU              CCGCGAUA GGAGG CUCGA   miRNA  3'          G     A     A 5'
Ortholog Group
Ortholog Groups: OG5_160419	Accession Taxon NP_568696 ( AT5G48380 ) Arabidopsis thaliana NP_001055553 Oryza sativa Japonica Group NP_001067622 Oryza sativa Japonica Group e_gw1.2.125.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1730037 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_209000044 Physcomitrella patens subsp. patens 30178.m000884 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF52058 9.1E-30 31 213 No hit NA Pfam PF08263 1.4E-4 33 71 IPR013210 Leucine-rich repeat-containing N-terminal, type 2 PANTHER PTHR24420 5.4E-182 77 620 No hit NA Pfam PF00560 1.0 102 122 IPR001611 Leucine-rich repeat SUPERFAMILY SSF56112 4.0E-64 281 586 IPR011009 Protein kinase-like domain ProSiteProfiles PS50011 27.6 303 596 IPR000719 Protein kinase, catalytic domain Pfam PF07714 6.2E-34 305 518 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787