Basic information
Locus name	AT5G06300
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	carboxy-lyase; FUNCTIONS IN: carboxy-lyase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37210.1); Has 3184 Blast hits to 3182 proteins in 788 species: Archae - 8; Bacteria - 1875; Metazoa - 10; Fungi - 79; Plants - 196; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G06300.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128808	Accession Taxon NP_181143 Arabidopsis thaliana NP_181258 Arabidopsis thaliana NP_190913 Arabidopsis thaliana NP_196248 ( AT5G06300 ) Arabidopsis thaliana NP_196756 Arabidopsis thaliana NP_565668 Arabidopsis thaliana NP_974768 Arabidopsis thaliana CMH205C Cyanidioschyzon merolae strain 10D CMQ414C Cyanidioschyzon merolae strain 10D 116096 Chlamydomonas reinhardtii ACO68494 Micromonas sp. RCC299 NP_001043439 Oryza sativa Japonica Group NP_001044027 Oryza sativa Japonica Group NP_001048706 Oryza sativa Japonica Group NP_001050980 Oryza sativa Japonica Group NP_001051958 Oryza sativa Japonica Group NP_001053328 Oryza sativa Japonica Group NP_001056187 Oryza sativa Japonica Group NP_001056491 Oryza sativa Japonica Group NP_001064868 Oryza sativa Japonica Group estExt_genewise1.C_Chr_02.00010510 Ostreococcus tauri e_gw1.117.117.1 Physcomitrella patens subsp. patens e_gw1.117.46.1 Physcomitrella patens subsp. patens e_gw1.13.349.1 Physcomitrella patens subsp. patens e_gw1.223.124.1 Physcomitrella patens subsp. patens e_gw1.91.200.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_540133 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_470263 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_223000064 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_306000003 Physcomitrella patens subsp. patens 27538.m000319 Ricinus communis 28324.m000393 Ricinus communis 29739.m003571 Ricinus communis 29864.m001497 Ricinus communis 30078.m002326 Ricinus communis 30170.m014168 Ricinus communis 30170.m014330 Ricinus communis fgenesh1_pg.C_chr_6000573 Thalassiosira pseudonana CCMP1335 XP_002951831 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31223 7.5E-112 1 216 No hit NA SUPERFAMILY SSF102405 2.1E-61 7 186 No hit NA TIGRFAM TIGR00730 7.4E-61 9 186 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Pfam PF03641 5.7E-48 53 183 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787