Basic information
Locus name	AT4G32130
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	carbohydrate binding; FUNCTIONS IN: carbohydrate binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: male gametophyte, callus, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784); BEST Arabidopsis thaliana protein match is: carbohydrate binding (TAIR:AT2G25310.1); Has 213 Blast hits to 213 proteins in 94 species: Archae - 0; Bacteria - 2; Metazoa - 121; Fungi - 44; Plants - 26; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function carbohydrate binding
Sequence	AT4G32130.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129250	Accession Taxon NP_180103 Arabidopsis thaliana NP_194940 ( AT4G32130 ) Arabidopsis thaliana 183454 Chlamydomonas reinhardtii ACO61428 Micromonas sp. RCC299 NP_001058183 Oryza sativa Japonica Group 0700010127 Ostreococcus tauri estExt_gwp_gw1.C_1680006 Physcomitrella patens subsp. patens 29848.m004593 Ricinus communis estExt_fgenesh1_pg.C_chr_50442 Thalassiosira pseudonana CCMP1335 XP_002951814 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13605 1.0E-77 1 200 No hit NA SUPERFAMILY SSF49452 2.9E-10 32 111 IPR013784 Carbohydrate-binding-like fold Pfam PF09430 2.7E-29 52 156 IPR019008 Domain of unknown function DUF2012
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787