Basic information
Locus name	AT3G18430
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 1 (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-Hand type (InterPro:IPR011992), EF hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: CAM9 (CALMODULIN 9); calcium ion binding (TAIR:AT3G51920.1); Has 3772 Blast hits to 3771 proteins in 389 species: Archae - 0; Bacteria - 11; Metazoa - 2178; Fungi - 257; Plants - 701; Viruses - 0; Other Eukaryotes - 625 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function calcium ion binding
Sequence	AT3G18430.1 | Genomic | mRNA | CDS | Protein AT3G18430.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127723	Accession Taxon NP_566610 ( AT3G18430 ) Arabidopsis thaliana NP_567492 Arabidopsis thaliana CMJ269C Cyanidioschyzon merolae strain 10D 119565 Chlamydomonas reinhardtii ACO64878 Micromonas sp. RCC299 NP_001056148 Oryza sativa Japonica Group e_gw1.07.00.429.1 Ostreococcus tauri estExt_Genewise1.C_2110012 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_372000005 Physcomitrella patens subsp. patens 29742.m001417 Ricinus communis 29841.m002907 Ricinus communis gw1.1.808.1 Thalassiosira pseudonana CCMP1335 XP_002951476 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23056 1.7E-48 1 160 No hit NA SUPERFAMILY SSF47473 1.5E-28 1 161 No hit NA ProSiteProfiles PS50222 9.9 27 62 IPR002048 EF-hand domain Pfam PF13499 1.4E-9 32 118 IPR011992 EF-hand-like domain ProSiteProfiles PS50222 12.1 91 126 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 104 116 IPR018247 EF-Hand 1, calcium-binding site
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787