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| Locus name | AT5G23950 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Others | | Effect for Senescence | unclear | | Gene Description | C2 domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 domain-containing protein (TAIR:AT1G07310.1); Has 7048 Blast hits to 1687 proteins in 171 species: Archae - 4; Bacteria - 820; Metazoa - 2245; Fungi - 1101; Plants - 496; Viruses - 60; Other Eukaryotes - 2322 (source: NCBI BLink). | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Gene Ontology | | | Sequence | AT5G23950.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT5G23950.1
miRNA: ath-miR414
miRNA: ath-miR414
mfe: -34.4 kcal/mol
p-value: 0.000078
position: 659
target 5' A U U 3'
UGAUGAUGAUGAUGA GAUGA
ACUGCUACUACUACU CUACU
miRNA 3' U 5'
target: AT5G23950.1
miRNA: ath-miR834
miRNA: ath-miR834
mfe: -37.6 kcal/mol
p-value: 0.000070
position: 635
target 5' A G 3'
UGCUGCUGCUGCUGCUGCU
AUGGUGGCGAUGACGAUGG
miRNA 3' A U 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_176895 | |
| Cross Link | |
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