Basic information
Locus name	AT5G21010
Alias	ATBPM5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	BTB-POZ and MATH domain 5 (ATBPM5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ATBPM6 (BTB-POZ and MATH domain 6); protein binding (TAIR:AT3G43700.1); Has 5740 Blast hits to 5554 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 4466; Fungi - 135; Plants - 899; Viruses - 48; Other Eukaryotes - 192 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G21010.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_168261	Accession Taxon NP_189956 Arabidopsis thaliana NP_197600 ( AT5G21010 ) Arabidopsis thaliana NP_001053940 Oryza sativa Japonica Group
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF49599 1.3E-34 25 164 IPR008974 TRAF-like ProSiteProfiles PS50144 23.2 28 162 IPR002083 MATH SMART SM00061 7.6E-10 33 145 IPR002083 MATH Pfam PF00917 3.3E-8 48 162 IPR002083 MATH PANTHER PTHR24411 8.9E-69 60 265 No hit NA SUPERFAMILY SSF54695 5.8E-28 176 310 IPR011333 BTB/POZ fold Pfam PF00651 1.2E-22 191 310 IPR013069 BTB/POZ ProSiteProfiles PS50097 19.6 198 264 IPR000210 BTB/POZ-like SMART SM00225 9.2E-24 198 312 IPR000210 BTB/POZ-like
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787