|
|
| Locus name | AT1G68820 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Others:Unknown |
| Effect for Senescence | Unclear |
| Gene Description | membrane protein, putative. |
| Evidence | Molecular evidence: SSH and Northern [Ref 1] |
| References | 1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani MLarge-scale identification of leaf senescence-associated genes.Plant J. 2003 Dec;36(5):629-42 |
| Gene Ontology | |
| Sequence | AT1G68820.1 | Genomic | mRNA | CDS | Protein
|
|
| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
|
| Details | | target: AT1G68820.1
miRNA: ath-miR860
miRNA: ath-miR860
mfe: -21.7 kcal/mol
p-value: 0.055099
position: 1332
target 5' A C A U A 3'
AUG CA AGUCUGAUCU GUUGA
UAU GU UCAGGUUAGA UAACU
miRNA 3' A 5'
|
|
| Ortholog Group | |
|
| Ortholog Groups: OG5_156441 | |
| Cross Link | |
|
|
