Basic information
Locus name	AT3G21960
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	beta-galactosidase; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, beta-galactosidase complex; EXPRESSED IN: leaf whorl, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944), Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase-related (TAIR:AT2G31620.1).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT3G21960.1 | Genomic | mRNA | CDS | Protein AT3G21960.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_132178	Accession Taxon NP_001154634 Arabidopsis thaliana NP_001154635 ( AT3G21960 ) Arabidopsis thaliana NP_001154636 Arabidopsis thaliana NP_180720 Arabidopsis thaliana NP_188828 Arabidopsis thaliana NP_188829 Arabidopsis thaliana NP_188830 Arabidopsis thaliana NP_188831 Arabidopsis thaliana NP_188832 Arabidopsis thaliana NP_188834 Arabidopsis thaliana NP_188835 Arabidopsis thaliana NP_188836 Arabidopsis thaliana NP_188837 Arabidopsis thaliana NP_188838 Arabidopsis thaliana NP_188839 Arabidopsis thaliana NP_188840 Arabidopsis thaliana NP_188841 Arabidopsis thaliana NP_188842 Arabidopsis thaliana NP_188843 Arabidopsis thaliana NP_189547 Arabidopsis thaliana NP_189548 Arabidopsis thaliana NP_191390 Arabidopsis thaliana NP_193785 Arabidopsis thaliana NP_193798 Arabidopsis thaliana NP_193799 Arabidopsis thaliana NP_193800 Arabidopsis thaliana NP_193802 Arabidopsis thaliana NP_567603 Arabidopsis thaliana NP_567604 Arabidopsis thaliana NP_567605 Arabidopsis thaliana NP_567606 Arabidopsis thaliana NP_567607 Arabidopsis thaliana NP_567608 Arabidopsis thaliana NP_567609 Arabidopsis thaliana NP_567610 Arabidopsis thaliana NP_567611 Arabidopsis thaliana NP_567612 Arabidopsis thaliana NP_567613 Arabidopsis thaliana NP_567614 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32411 5.4E-237 2 252 No hit NA ProSiteProfiles PS51473 16.2 39 141 IPR002902 Gnk2-homologous domain Pfam PF01657 6.6E-21 42 137 IPR002902 Gnk2-homologous domain ProSiteProfiles PS51473 15.8 147 259 IPR002902 Gnk2-homologous domain Pfam PF01657 4.9E-19 160 255 IPR002902 Gnk2-homologous domain