Basic information
Locus name	AT5G56870
Alias	BGAL4
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	beta-galactosidase 4 (BGAL4); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system, beta-galactosidase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding (TAIR:AT4G26140.1); Has 1249 Blast hits to 1158 proteins in 255 species: Archae - 11; Bacteria - 358; Metazoa - 340; Fungi - 120; Plants - 372; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process molecular function hydrolase activity, hydrolyzing O-glycosyl compounds
Pathway	KEGG map00052 (EC 3.2.1.23) map00511 (EC 3.2.1.23) map00531 (EC 3.2.1.23) map00600 (EC 3.2.1.23) map00604 (EC 3.2.1.23)
Sequence	AT5G56870.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130580	Accession Taxon NP_001154292 Arabidopsis thaliana NP_175127 Arabidopsis thaliana NP_177866 Arabidopsis thaliana NP_179264 Arabidopsis thaliana NP_187988 Arabidopsis thaliana NP_190852 Arabidopsis thaliana NP_194344 Arabidopsis thaliana NP_195571 Arabidopsis thaliana NP_200498 ( AT5G56870 ) Arabidopsis thaliana NP_201186 Arabidopsis thaliana NP_565755 Arabidopsis thaliana NP_567973 Arabidopsis thaliana NP_568001 Arabidopsis thaliana NP_568399 Arabidopsis thaliana NP_568978 Arabidopsis thaliana NP_683341 Arabidopsis thaliana NP_849506 Arabidopsis thaliana NP_849553 Arabidopsis thaliana NP_850121 Arabidopsis thaliana CMP078C Cyanidioschyzon merolae strain 10D NP_001043252 Oryza sativa Japonica Group NP_001043405 Oryza sativa Japonica Group NP_001044964 Oryza sativa Japonica Group NP_001046310 Oryza sativa Japonica Group NP_001049068 Oryza sativa Japonica Group NP_001049591 Oryza sativa Japonica Group NP_001057920 Oryza sativa Japonica Group NP_001062440 Oryza sativa Japonica Group NP_001064366 Oryza sativa Japonica Group NP_001066673 Oryza sativa Japonica Group e_gw1.189.26.1 Physcomitrella patens subsp. patens e_gw1.24.11.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_100096 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1890048 Physcomitrella patens subsp. patens 28076.m000428 Ricinus communis 28694.m000675 Ricinus communis 29648.m002008 Ricinus communis 29739.m003719 Ricinus communis 29739.m003720 Ricinus communis 29739.m003740 Ricinus communis 29815.m000493 Ricinus communis 29904.m002899 Ricinus communis 29912.m005323 Ricinus communis 29912.m005324 Ricinus communis 29917.m001961 Ricinus communis 30074.m001370 Ricinus communis 30131.m007094 Ricinus communis 30170.m014108 Ricinus communis 30193.m000718 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23421 0.0 1 720 IPR001944 Glycoside hydrolase, family 35 ProSiteProfiles PS51257 5.0 1 23 No hit NA SUPERFAMILY SSF51445 1.1E-105 28 343 IPR017853 Glycoside hydrolase, superfamily Pfam PF01301 2.3E-112 36 339 IPR001944 Glycoside hydrolase, family 35 PRINTS PR00742 9.0E-82 39 56 IPR001944 Glycoside hydrolase, family 35 PRINTS PR00742 9.0E-82 60 78 IPR001944 Glycoside hydrolase, family 35 PRINTS PR00742 9.0E-82 115 134 IPR001944 Glycoside hydrolase, family 35 PRINTS PR00742 9.0E-82 172 187 IPR001944 Glycoside hydrolase, family 35 ProSitePatterns PS01182 NA 174 186 IPR019801 Glycoside hydrolase, family 35, conserved site PRINTS PR00742 9.0E-82 251 266 IPR001944 Glycoside hydrolase, family 35 PRINTS PR00742 9.0E-82 288 303 IPR001944 Glycoside hydrolase, family 35 PRINTS PR00742 9.0E-82 307 323 IPR001944 Glycoside hydrolase, family 35 SUPERFAMILY SSF49785 8.8E-25 401 571 IPR008979 Galactose-binding domain-like SUPERFAMILY SSF49785 2.8E-23 581 662 IPR008979 Galactose-binding domain-like PRINTS PR00742 9.0E-82 616 630 IPR001944 Glycoside hydrolase, family 35 PRINTS PR00742 9.0E-82 643 659 IPR001944 Glycoside hydrolase, family 35 SUPERFAMILY SSF49785 2.8E-23 689 720 IPR008979 Galactose-binding domain-like
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787