Basic information
Locus name	AT3G62420
Alias	ATBZIP53
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	BASIC REGION/LEUCINE ZIPPER MOTIF 53 (ATBZIP53); FUNCTIONS IN: transcription factor activity, sequence-specific DNA binding, protein heterodimerization activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44); DNA binding / protein heterodimerization/ transcription factor (TAIR:AT1G75390.1); Has 854 Blast hits to 852 proteins in 70 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 2; Plants - 823; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT3G62420.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_190347	Accession Taxon NP_191801 ( AT3G62420 ) Arabidopsis thaliana NP_001054544 Oryza sativa Japonica Group 30076.m004659 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22952 1.1E-67 17 130 No hit NA SMART SM00338 4.1E-15 21 85 IPR004827 Basic-leucine zipper domain ProSiteProfiles PS50217 10.6 23 86 IPR004827 Basic-leucine zipper domain Pfam PF00170 1.0E-10 25 83 IPR004827 Basic-leucine zipper domain SUPERFAMILY SSF57959 2.0E-11 25 76 No hit NA ProSitePatterns PS00036 NA 28 43 IPR004827 Basic-leucine zipper domain Coils Coil NA 55 111 No hit NA