Basic information
Locus name	AT5G13160
Alias	PBS1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	avrPphB susceptible 1 (PBS1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation, defense response to bacterium, incompatible interaction, N-terminal protein myristoylation, defense response; LOCATED IN: microsome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase (InterPro:IPR002290), Tyrosine protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-related (InterPro:IPR017442), Serine/threonine protein kinase, active site (InterPro:IPR008271), Protein kinase-like (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G18610.1); Has 82983 Blast hits to 82027 proteins in 2953 species: Archae - 50; Bacteria - 7501; Metazoa - 36533; Fungi - 6388; Plants - 18666; Viruses - 324; Other Eukaryotes - 13521 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein phosphorylation molecular function ATP binding protein kinase activity protein serine/threonine kinase activity
Sequence	AT5G13160.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_141124	Accession Taxon NP_196820 ( AT5G13160 ) Arabidopsis thaliana NP_197362 Arabidopsis thaliana NP_001045326 Oryza sativa Japonica Group NP_001046943 Oryza sativa Japonica Group NP_001052650 Oryza sativa Japonica Group NP_001055359 Oryza sativa Japonica Group e_gw1.116.110.1 Physcomitrella patens subsp. patens e_gw1.116.35.1 Physcomitrella patens subsp. patens e_gw1.478.5.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_3070015 Physcomitrella patens subsp. patens 29726.m004001 Ricinus communis 29929.m004600 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24420 2.3E-255 25 398 No hit NA SUPERFAMILY SSF56112 3.0E-80 72 358 IPR011009 Protein kinase-like domain ProSiteProfiles PS50011 37.8 86 363 IPR000719 Protein kinase, catalytic domain Pfam PF00069 6.1E-46 91 355 IPR000719 Protein kinase, catalytic domain ProSitePatterns PS00107 NA 92 115 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 209 221 IPR008271 Serine/threonine-protein kinase, active site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787