Basic information
Locus name	AT5G01990
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway
Effect for Senescence	unclear
Gene Description	auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: auxin efflux carrier family protein (TAIR:AT1G71090.1); Has 303 Blast hits to 283 proteins in 69 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 152; Plants - 93; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process transmembrane transport cellular component integral to membrane
Sequence	AT5G01990.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_159813	Accession Taxon NP_195819 ( AT5G01990 ) Arabidopsis thaliana NP_001044627 Oryza sativa Japonica Group NP_001055865 Oryza sativa Japonica Group estExt_Genewise1.C_4970001 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_420000016 Physcomitrella patens subsp. patens 27955.m000384 Ricinus communis XP_002957799 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31419 2.6E-251 1 431 No hit NA Pfam PF03547 3.2E-81 31 423 IPR004776 Auxin efflux carrier