Basic information
Locus name	AT5G57035
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ ubiquitin-protein ligase; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, core (InterPro:IPR000719), U box (InterPro:IPR003613), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT2G19410.1); Has 84786 Blast hits to 83878 proteins in 3195 species: Archae - 70; Bacteria - 7795; Metazoa - 36785; Fungi - 6568; Plants - 19019; Viruses - 310; Other Eukaryotes - 14239 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein phosphorylation protein ubiquitination response to stress cellular component ubiquitin ligase complex molecular function ATP binding protein kinase activity protein serine/threonine kinase activity ubiquitin-protein ligase activity
Sequence	AT5G57035.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_146895	Accession Taxon NP_179531 Arabidopsis thaliana NP_680448 ( AT5G57035 ) Arabidopsis thaliana 116959 Chlamydomonas reinhardtii NP_001046306 Oryza sativa Japonica Group NP_001047666 Oryza sativa Japonica Group NP_001047670 Oryza sativa Japonica Group NP_001056893 Oryza sativa Japonica Group NP_001057924 Oryza sativa Japonica Group NP_001065303 Oryza sativa Japonica Group 29912.m005314 Ricinus communis 30174.m008609 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF52402 5.2E-10 20 151 No hit NA Pfam PF00582 1.8E-4 32 143 IPR006016 UspA Coils Coil NA 298 319 No hit NA PANTHER PTHR24420 2.9E-241 334 731 No hit NA Coils Coil NA 344 372 No hit NA Coils Coil NA 377 398 No hit NA SUPERFAMILY SSF56112 5.9E-69 408 681 IPR011009 Protein kinase-like domain ProSiteProfiles PS50011 34.8 425 714 IPR000719 Protein kinase, catalytic domain SMART SM00220 3.7E-31 425 688 IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain Pfam PF00069 2.4E-42 428 679 IPR000719 Protein kinase, catalytic domain ProSitePatterns PS00107 NA 431 452 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 543 555 IPR008271 Serine/threonine-protein kinase, active site SUPERFAMILY SSF57850 2.7E-23 704 779 No hit NA Pfam PF04564 1.1E-18 709 776 IPR003613 U box domain SMART SM00504 2.9E-26 711 774 IPR003613 U box domain