Basic information
Locus name	AT4G38800
Alias	ATMTN1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ATMTN1; FUNCTIONS IN: methylthioadenosine nucleosidase activity, catalytic activity; INVOLVED IN: nucleoside metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphorylase (InterPro:IPR000845), Nucleoside phosphorylase, family 1 (InterPro:IPR018017); BEST Arabidopsis thaliana protein match is: ATMTN2; methylthioadenosine nucleosidase (TAIR:AT4G34840.1); Has 1331 Blast hits to 1331 proteins in 597 species: Archae - 0; Bacteria - 1240; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process nucleoside metabolic process molecular function catalytic activity
Sequence	AT4G38800.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130719	Accession Taxon NP_195210 Arabidopsis thaliana NP_195591 ( AT4G38800 ) Arabidopsis thaliana 135128 Chlamydomonas reinhardtii ACO65155 Micromonas sp. RCC299 NP_001042490 Oryza sativa Japonica Group NP_001056592 Oryza sativa Japonica Group fgenesh1_pm.C_Chr_10.0001000060 Ostreococcus tauri estExt_Genewise1.C_2570008 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_255000041 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_159000016 Physcomitrella patens subsp. patens 29711.m000333 Ricinus communis e_gw1.10.168.1 Thalassiosira pseudonana CCMP1335 XP_002954161 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR21234 1.9E-118 24 262 IPR018017 Nucleoside phosphorylase Pfam PF01048 1.1E-23 29 250 IPR000845 Nucleoside phosphorylase domain SUPERFAMILY SSF53167 9.7E-36 29 243 No hit NA
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787