Basic information
Locus name	AT3G16720
Alias	ATL2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ATL2; FUNCTIONS IN: protein binding, zinc ion binding; INVOLVED IN: response to chitin, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G15975.1); Has 6548 Blast hits to 6529 proteins in 234 species: Archae - 0; Bacteria - 2; Metazoa - 2210; Fungi - 555; Plants - 2731; Viruses - 76; Other Eukaryotes - 974 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding zinc ion binding
Sequence	AT3G16720.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_190201	Accession Taxon NP_188294 ( AT3G16720 ) Arabidopsis thaliana gw1.38.143.1 Physcomitrella patens subsp. patens 29726.m004079 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22764 3.6E-58 30 253 No hit NA SUPERFAMILY SSF57850 2.8E-23 99 167 No hit NA Pfam PF13639 3.6E-16 118 162 IPR001841 Zinc finger, RING-type ProSiteProfiles PS50089 12.9 119 161 IPR001841 Zinc finger, RING-type SMART SM00184 1.4E-6 119 160 IPR001841 Zinc finger, RING-type
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787