Basic information
Locus name	AT3G55560
Alias	AGF2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	AT-hook protein of GA feedback 2 (AGF2); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: DNA-binding protein-related (TAIR:AT4G14465.1); Has 448 Blast hits to 446 proteins in 30 species: Archae - 0; Bacteria - 8; Metazoa - 16; Fungi - 3; Plants - 417; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT3G55560.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_212527	Accession Taxon NP_191115 ( AT3G55560 ) Arabidopsis thaliana 30143.m001173 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31100 3.2E-117 1 309 No hit NA PIRSF PIRSF016021 1.4E-192 1 310 IPR014476 Predicted AT-hook DNA-binding SUPERFAMILY SSF117856 6.5E-32 112 245 No hit NA Pfam PF03479 1.0E-36 116 232 IPR005175 Domain of unknown function DUF296