Basic information
Locus name	AT4G24990
Alias	ATGP4
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	ATGP4; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000), Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR) (TAIR:AT3G26980.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT4G24990.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_142954	Accession Taxon NP_173624 Arabidopsis thaliana NP_177910 Arabidopsis thaliana NP_189334 Arabidopsis thaliana NP_194229 ( AT4G24990 ) Arabidopsis thaliana 187189 Chlamydomonas reinhardtii NP_001048133 Oryza sativa Japonica Group NP_001052648 Oryza sativa Japonica Group e_gw1.113.88.1 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_218000012 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_81000008 Physcomitrella patens subsp. patens 29908.m005974 Ricinus communis 30131.m007028 Ricinus communis XP_002945822 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF032572 1.2E-71 1 118 IPR017000 Membrane-anchored ubiquitin-fold protein, HCG-1 SUPERFAMILY SSF54236 9.8E-25 2 97 No hit NA Pfam PF13881 8.7E-41 5 116 No hit NA ProSiteProfiles PS50053 9.3 7 73 IPR019955 Ubiquitin supergroup
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787