Basic information
Locus name	AT5G16400
Alias	ATF2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ATF2; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: positive regulation of catalytic activity; LOCATED IN: chloroplast stroma, chloroplast, chloroplast thylakoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator (TAIR:AT3G02730.1); Has 10754 Blast hits to 10303 proteins in 1684 species: Archae - 133; Bacteria - 4409; Metazoa - 1651; Fungi - 679; Plants - 1032; Viruses - 3; Other Eukaryotes - 2847 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process cell redox homeostasis glycerol ether metabolic process molecular function electron carrier activity protein disulfide oxidoreductase activity
Sequence	AT5G16400.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_137505	Accession Taxon NP_186922 Arabidopsis thaliana NP_197144 ( AT5G16400 ) Arabidopsis thaliana CMN279C Cyanidioschyzon merolae strain 10D 139781 Chlamydomonas reinhardtii 194687 Chlamydomonas reinhardtii 195886 Chlamydomonas reinhardtii ACO70378 Micromonas sp. RCC299 NP_001045167 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_Chr_11.00010006 Ostreococcus tauri e_gw1.271.34.1 Physcomitrella patens subsp. patens e_gw1.314.37.1 Physcomitrella patens subsp. patens gw1.273.25.1 Physcomitrella patens subsp. patens 29929.m004565 Ricinus communis e_gw1.2.808.1 Thalassiosira pseudonana CCMP1335 XP_002948089 Volvox carteri f. nagariensis XP_002948476 Volvox carteri f. nagariensis XP_002958831 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10438 2.0E-126 1 184 IPR005746 Thioredoxin ProSiteProfiles PS51352 13.7 59 184 IPR012336 Thioredoxin-like fold SUPERFAMILY SSF52833 3.8E-31 73 182 IPR012336 Thioredoxin-like fold Pfam PF00085 7.6E-28 81 181 IPR013766 Thioredoxin domain PRINTS PR00421 1.9E-5 100 108 IPR005746 Thioredoxin ProSitePatterns PS00194 NA 101 119 IPR017937 Thioredoxin, conserved site PRINTS PR00421 1.9E-5 108 117 IPR005746 Thioredoxin PRINTS PR00421 1.9E-5 148 159 IPR005746 Thioredoxin
Subcellular Localization
Localization	plastid
Evidence	SUBAcon
Pubmed ID	23180787