Basic information   
Locus name AT1G52880
AliasANAC018
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation:NAC
Effect for SenescenceUnclear
Gene DescriptionTranscription factor with a NAC domain.
EvidenceMolecular evidence: SSH and Northern [Ref 1]
References
1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M
Large-scale identification of leaf senescence-associated genes.
Plant J. 2003 Dec;36(5):629-42

Gene Ontology
biological process
molecular function
SequenceAT1G52880.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_135169
AccessionTaxon
NP_001078452Arabidopsis thaliana
NP_171677Arabidopsis thaliana
NP_175696 ( AT1G52880 ) Arabidopsis thaliana
NP_175697Arabidopsis thaliana
NP_188169Arabidopsis thaliana
NP_188170Arabidopsis thaliana
NP_564771Arabidopsis thaliana
NP_567773Arabidopsis thaliana
NP_001044617Oryza sativa Japonica Group
NP_001045016Oryza sativa Japonica Group
NP_001051682Oryza sativa Japonica Group
NP_001059213Oryza sativa Japonica Group
NP_001060017Oryza sativa Japonica Group
e_gw1.117.35.1Physcomitrella patens subsp. patens
e_gw1.140.53.1Physcomitrella patens subsp. patens
e_gw1.15.275.1Physcomitrella patens subsp. patens
e_gw1.164.18.1Physcomitrella patens subsp. patens
e_gw1.164.26.1Physcomitrella patens subsp. patens
e_gw1.259.28.1Physcomitrella patens subsp. patens
e_gw1.259.4.1Physcomitrella patens subsp. patens
e_gw1.5.134.1Physcomitrella patens subsp. patens
27961.m000091Ricinus communis
28219.m000090Ricinus communis
29648.m002012Ricinus communis
29851.m002359Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR317191.2E-1221233No hitNA
SUPERFAMILYSSF1019415.0E-6512178IPR003441No apical meristem (NAM) protein
PfamPF023656.3E-5117146IPR003441No apical meristem (NAM) protein
ProSiteProfilesPS5100561.917177IPR003441No apical meristem (NAM) protein
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787