Basic information
Locus name	AT5G47240
Alias	ATNUDT8
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Arabidopsis thaliana Nudix hydrolase homolog 8 (atnudt8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX (InterPro:IPR015797), Anti-sense to fibroblast growth factor protein GFG (InterPro:IPR003293), NUDIX hydrolase, core (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2); ADP-ribose diphosphatase/ NAD or NADH binding / hydrolase (TAIR:AT5G47650.1); Has 869 Blast hits to 869 proteins in 223 species: Archae - 10; Bacteria - 416; Metazoa - 165; Fungi - 2; Plants - 87; Viruses - 2; Other Eukaryotes - 187 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function hydrolase activity
Sequence	AT5G47240.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130421	Accession Taxon NP_178524 Arabidopsis thaliana NP_178526 Arabidopsis thaliana NP_193008 Arabidopsis thaliana NP_568680 ( AT5G47240 ) Arabidopsis thaliana NP_568687 Arabidopsis thaliana NP_849367 Arabidopsis thaliana NP_849368 Arabidopsis thaliana 104774 Chlamydomonas reinhardtii ACO62807 Micromonas sp. RCC299 NP_001053476 Oryza sativa Japonica Group NP_001058136 Oryza sativa Japonica Group e_gw1.15.00.214.1 Ostreococcus tauri e_gw1.38.99.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_140228 Physcomitrella patens subsp. patens 27401.m000288 Ricinus communis 28663.m000052 Ricinus communis 29629.m001372 Ricinus communis 29966.m000231 Ricinus communis e_gw1.8.198.1 Thalassiosira pseudonana CCMP1335 gw1.11a.130.1 Thalassiosira pseudonana CCMP1335 XP_002948659 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13994 5.8E-229 35 363 No hit NA PRINTS PR01356 3.6E-10 147 165 IPR003293 Nudix hydrolase 6-like SUPERFAMILY SSF55811 6.5E-29 155 319 IPR015797 NUDIX hydrolase domain-like PRINTS PR01356 3.6E-10 186 204 IPR003293 Nudix hydrolase 6-like ProSiteProfiles PS51462 16.0 188 318 IPR000086 NUDIX hydrolase domain Pfam PF00293 3.9E-17 190 306 IPR000086 NUDIX hydrolase domain ProSitePatterns PS00893 NA 225 246 IPR020084 NUDIX hydrolase, conserved site PRINTS PR01356 3.6E-10 274 298 IPR003293 Nudix hydrolase 6-like