Basic information
Locus name	AT4G17160
Alias	ATRABB1A
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	ARABIDOPSIS RAB GTPASE HOMOLOG B1A (ATRABB1A); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C); GTP binding / GTPase (TAIR:AT4G17170.1); Has 21640 Blast hits to 21604 proteins in 604 species: Archae - 13; Bacteria - 102; Metazoa - 11931; Fungi - 2862; Plants - 1809; Viruses - 19; Other Eukaryotes - 4904 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process small GTPase mediated signal transduction molecular function GTP binding
Pathway	Reactome REACT_11044
Sequence	AT4G17160.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51419 27.8 2 204 No hit NA SUPERFAMILY SSF52540 9.6E-59 2 177 IPR027417 P-loop containing nucleoside triphosphate hydrolase PANTHER PTHR24073 1.3E-130 3 205 No hit NA SMART SM00173 9.6E-38 4 170 IPR020849 Small GTPase superfamily, Ras type TIGRFAM TIGR00231 5.9E-33 6 161 IPR005225 Small GTP-binding protein domain PRINTS PR00449 6.2E-42 7 28 IPR001806 Small GTPase superfamily SMART SM00175 2.3E-100 7 170 IPR003579 Small GTPase superfamily, Rab type Pfam PF00071 5.8E-63 8 168 IPR001806 Small GTPase superfamily SMART SM00174 1.8E-12 9 170 IPR003578 Small GTPase superfamily, Rho type SMART SM00176 6.1E-5 12 204 IPR002041 Ran GTPase PRINTS PR00449 6.2E-42 30 46 IPR001806 Small GTPase superfamily PRINTS PR00449 6.2E-42 48 70 IPR001806 Small GTPase superfamily PRINTS PR00449 6.2E-42 110 123 IPR001806 Small GTPase superfamily PRINTS PR00449 6.2E-42 145 167 IPR001806 Small GTPase superfamily