Basic information
Locus name	AT3G16640
Alias	TCTP
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Unknown
Effect for Senescence	Unclear
Gene Description	Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila.Upregulated in senescent leaves.
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Sequence	AT3G16640.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G16640.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -28.7 kcal/mol  p-value: 0.000554  position:  265  target 5' C   A  A              A 3'             UGA GA GGUGGUGAGGAUGA              ACU CU CUACUACUUCUACU   miRNA  3'     G  A                5'
Ortholog Group
Ortholog Groups: OG5_127617	Accession Taxon NP_187205 Arabidopsis thaliana NP_188286 ( AT3G16640 ) Arabidopsis thaliana CMQ113C Cyanidioschyzon merolae strain 10D NP_001068405 Oryza sativa Japonica Group estExt_Genewise1.C_270023 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_33000130 Physcomitrella patens subsp. patens 29726.m004052 Ricinus communis 30128.m008835 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF00838 7.1E-62 1 165 IPR018105 Translationally controlled tumour protein PRINTS PR01653 6.1E-25 1 21 IPR018105 Translationally controlled tumour protein SUPERFAMILY SSF51316 9.1E-60 1 168 IPR011057 Mss4-like PANTHER PTHR11991 2.0E-82 2 168 IPR018105 Translationally controlled tumour protein ProSitePatterns PS01002 NA 45 55 IPR018103 Translationally controlled tumour protein, conserved site PRINTS PR01653 6.1E-25 46 57 IPR018105 Translationally controlled tumour protein PRINTS PR01653 6.1E-25 60 79 IPR018105 Translationally controlled tumour protein ProSitePatterns PS01003 NA 125 147 IPR018103 Translationally controlled tumour protein, conserved site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787