Basic information
Locus name	AT2G28840
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ankyrin repeat family protein; FUNCTIONS IN: protein binding, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT2G28840.1 | Genomic | mRNA | CDS | Protein AT2G28840.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_153031	Accession Taxon NP_001118406 Arabidopsis thaliana NP_180450 ( AT2G28840 ) Arabidopsis thaliana 171392 Chlamydomonas reinhardtii NP_001045554 Oryza sativa Japonica Group NP_001054449 Oryza sativa Japonica Group 29520.m000089 Ricinus communis XP_002955294 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF48403 2.8E-48 16 249 IPR020683 Ankyrin repeat-containing domain PANTHER PTHR24128 1.3E-33 22 236 No hit NA Pfam PF12796 9.4E-13 36 106 IPR020683 Ankyrin repeat-containing domain ProSiteProfiles PS50088 10.3 45 77 IPR002110 Ankyrin repeat ProSiteProfiles PS50297 40.9 45 240 IPR020683 Ankyrin repeat-containing domain SMART SM00248 0.0 45 74 IPR002110 Ankyrin repeat ProSiteProfiles PS50088 10.4 78 110 IPR002110 Ankyrin repeat SMART SM00248 8.2E-4 78 107 IPR002110 Ankyrin repeat Pfam PF12796 1.7E-12 110 185 IPR020683 Ankyrin repeat-containing domain SMART SM00248 0.0 112 142 IPR002110 Ankyrin repeat ProSiteProfiles PS50088 11.1 157 189 IPR002110 Ankyrin repeat SMART SM00248 0.0 157 186 IPR002110 Ankyrin repeat Pfam PF12796 1.2E-8 192 253 IPR020683 Ankyrin repeat-containing domain ProSiteProfiles PS50088 12.9 194 226 IPR002110 Ankyrin repeat SMART SM00248 0.0 194 223 IPR002110 Ankyrin repeat Coils Coil NA 268 289 No hit NA SUPERFAMILY SSF57850 3.8E-7 312 376 No hit NA ProSiteProfiles PS50089 9.5 319 368 IPR001841 Zinc finger, RING-type