Basic information
Locus name	AT5G24090
Alias	VHIN1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	acidic endochitinase (CHIB1); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process molecular function hydrolase activity, hydrolyzing O-glycosyl compounds
Pathway	KEGG map00520 (EC 3.2.1.14)
Sequence	AT5G24090.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130746	Accession Taxon NP_197797 ( AT5G24090 ) Arabidopsis thaliana NP_001042831 Oryza sativa Japonica Group NP_001043772 Oryza sativa Japonica Group NP_001043912 Oryza sativa Japonica Group NP_001043931 Oryza sativa Japonica Group NP_001044871 Oryza sativa Japonica Group NP_001044872 Oryza sativa Japonica Group 29595.m000280 Ricinus communis 29717.m000230 Ricinus communis 30169.m006556 Ricinus communis 30169.m006557 Ricinus communis 30174.m008677 Ricinus communis 30174.m008678 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51257 5.0 1 19 No hit NA PANTHER PTHR31939 1.3E-184 3 302 No hit NA SUPERFAMILY SSF51445 7.3E-95 28 298 IPR017853 Glycoside hydrolase, superfamily Pfam PF00704 7.8E-26 32 252 IPR001223 Glycoside hydrolase, family 18, catalytic domain ProSitePatterns PS01095 NA 148 156 IPR001579 Glycoside hydrolase, chitinase active site
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787