Leaf Senescence DataBase

Basic information

Locus name

AT5G64250

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Redox regulation

Effect for Senescence

unclear

Gene Description

2-nitropropane dioxygenase family / NPD family; FUNCTIONS IN: oxidoreductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, response to symbiotic fungus, metabolic process; EXPRESSED IN: 23 plant structures;

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	oxidation-reduction process
molecular function	nitronate monooxygenase activity

Pathway

KEGG	map00910 (EC 1.13.12.16)
MetaCyc	PWY-723

Sequence

Ortholog Group

Ortholog Groups: OG5_129399

Accession	Taxon
NP_568988 ( AT5G64250 )	Arabidopsis thaliana
NP_851263	Arabidopsis thaliana
ACO67129	Micromonas sp. RCC299
NP_001062087	Oryza sativa Japonica Group
fgenesh1_pg.C_Chr_02.0001000194	Ostreococcus tauri
estExt_Genewise1.C_2260005	Physcomitrella patens subsp. patens
29806.m000957	Ricinus communis
32650.m000023	Ricinus communis
56992.m000013	Ricinus communis
fgenesh1_pg.C_chr_15000105	Thalassiosira pseudonana CCMP1335

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR32332	3.3E-125	1	333	No hit	NA
Pfam	PF03060	1.2E-66	3	318	IPR004136	2-nitropropane dioxygenase, NPD
SUPERFAMILY	SSF51412	1.5E-54	3	323	No hit	NA

Subcellular Localization

Localization 1
	Localization	cytosol
	Evidence	SUBAcon
	Pubmed ID	23180787

Localization 2
	Localization	cytosol,extracellular
	Evidence	SUBAcon
	Pubmed ID	23180787